Parameter file elements
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root
pedigrees
genotypes
grms
model
eqn
poly
jobs
solvers
samplers
element name | element type | host element | hosts elements | element function | key string key word | key string variable | key string function | key string type |
---|---|---|---|---|---|---|---|---|
pedigrees | Automatic-optional | root | yes | host elements of specific pedigrees | pedigrees | pedigree names | nominates further elements | compulsory |
pedigree name | Nominated-compulsory | pedigrees | no | host information about a specific pedigree | file | pedigree file name | provides pedigree file name | compulsory |
switch | probabilistic | pedigree is probabilistic | optional | |||||
selfing | pedigree contains selfing | |||||||
phantomparents | integer | provides the number of individuals at the top of the pedigree which are phantom parents | optional |