Difference between revisions of "Parameter file elements"
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='''pedigrees'''= | ='''pedigrees'''= | ||
=genotypes= | ='''genotypes'''= | ||
=grms= | ='''grms'''= | ||
=model= | ='''model'''= | ||
==eqn== | =='''eqn'''== | ||
==poly== | =='''poly'''== | ||
=jobs= | ='''jobs'''= | ||
==solve== | =='''solve'''== | ||
==sample== | =='''sample'''== | ||
==pevsample== | =='''pevsample'''== | ||
==mcemreml== | =='''mcemreml'''== | ||
==yh== | =='''yh'''== | ||
=samplers= | ='''samplers'''= | ||
== | ==''sampler name''== | ||
=solvers= | ='''solvers'''= | ||
==''solver name''== | |||
==='''pcgiod'''=== | |||
{| class="wikitable sortable" | {| class="wikitable sortable" | ||
Revision as of 10:36, 3 January 2021
pedigrees
genotypes
grms
model
eqn
poly
jobs
solve
sample
pevsample
mcemreml
yh
samplers
sampler name
solvers
solver name
pcgiod
| element name | element type | host element | hosts elements | element function | key string key word | key string variable | key string function | key string type |
|---|---|---|---|---|---|---|---|---|
| pedigrees | Automatic-optional | root | yes | host elements of specific pedigrees | pedigrees | pedigree names | nominates further elements | compulsory |
| pedigree name | Nominated-compulsory | pedigrees | no | host information about a specific pedigree | file | pedigree file name | provides pedigree file name | compulsory |
| switch | probabilistic | pedigree is probabilistic | optional | |||||
| selfing | pedigree contains selfing | |||||||
| phantomparents | integer | provides the number of individuals at the top of the pedigree which are phantom parents | optional |